<?xml version="1.0" ?> <!--Example output for 3 chromosomes, some with multiple segments--> <lamarc version="2.1"> <format> <convert-output-to-eliminate-zero>true</convert-output-to-eliminate-zero> </format> <data> <region name="chrom1"> <effective-popsize>1.000000</effective-popsize> <spacing> <block name="chrom1-segment" /> </spacing> <population name="North"> <individual name="n_ind0"> <phase type="unknown"></phase> <sample name="n_ind0_a"> <datablock type="DNA"> ccccccAcc </datablock> </sample> <sample name="n_ind0_b"> <datablock type="DNA"> TcccccAcc </datablock> </sample> </individual> <individual name="n_ind1"> <phase type="unknown"></phase> <sample name="n_ind1_a"> <datablock type="DNA"> ccccccTcc </datablock> </sample> <sample name="n_ind1_b"> <datablock type="DNA"> TcccccTcc </datablock> </sample> </individual> <individual name="n_ind2"> <phase type="unknown"></phase> <sample name="n_ind2_a"> <datablock type="DNA"> ccccccGcc </datablock> </sample> <sample name="n_ind2_b"> <datablock type="DNA"> TcccccGcc </datablock> </sample> </individual> </population> <population name="South"> <individual name="s_ind0"> <phase type="unknown"></phase> <sample name="s_ind0_a"> <datablock type="DNA"> cTccTcccc </datablock> </sample> <sample name="s_ind0_b"> <datablock type="DNA"> ccccTcccc </datablock> </sample> </individual> <individual name="s_ind1"> <phase type="unknown"></phase> <sample name="s_ind1_a"> <datablock type="DNA"> cTccccccc </datablock> </sample> <sample name="s_ind1_b"> <datablock type="DNA"> ccccccccc </datablock> </sample> </individual> </population> </region> <region name="chrom2"> <effective-popsize>1.000000</effective-popsize> <spacing> <block name="chrom2-segment1"> <map-position> 1000 </map-position> <length> 500 </length> <offset> -4 </offset> <locations> 2 88 125 173 443 </locations> </block> <block name="chrom2-segment2"> <map-position> 5000 </map-position> <length> 250 </length> <offset> -4 </offset> <locations> 13 19 35 77 102 112 204 </locations> </block> </spacing> <population name="North"> <individual name="n_ind0"> <phase type="unknown"></phase> <phase type="unknown">13 19</phase> <sample name="n_ind0_a"> <datablock type="SNP"> Gaaaa </datablock> <datablock type="SNP"> Caaaaaa </datablock> </sample> <sample name="n_ind0_b"> <datablock type="SNP"> aGaaa </datablock> <datablock type="SNP"> aCaaaaa </datablock> </sample> </individual> <individual name="n_ind1"> <phase type="unknown"></phase> <phase type="unknown"></phase> <sample name="n_ind1_a"> <datablock type="SNP"> aaGaa </datablock> <datablock type="SNP"> aaCaaaa </datablock> </sample> <sample name="n_ind1_b"> <datablock type="SNP"> aaaGa </datablock> <datablock type="SNP"> aaaCaaa </datablock> </sample> </individual> <individual name="n_ind2"> <phase type="unknown"></phase> <phase type="unknown"></phase> <sample name="n_ind2_a"> <datablock type="SNP"> aaaaG </datablock> <datablock type="SNP"> aaaaCaa </datablock> </sample> <sample name="n_ind2_b"> <datablock type="SNP"> Taaaa </datablock> <datablock type="SNP"> aaaaaCa </datablock> </sample> </individual> </population> <population name="South"> <individual name="s_ind0"> <phase type="unknown"></phase> <phase type="unknown"></phase> <sample name="s_ind0_a"> <datablock type="SNP"> Taaaa </datablock> <datablock type="SNP"> Gaaaaaa </datablock> </sample> <sample name="s_ind0_b"> <datablock type="SNP"> aTaaa </datablock> <datablock type="SNP"> aGaaaaa </datablock> </sample> </individual> <individual name="s_ind1"> <phase type="unknown"></phase> <phase type="unknown"></phase> <sample name="s_ind1_a"> <datablock type="SNP"> aaTaa </datablock> <datablock type="SNP"> aaGaaaa </datablock> </sample> <sample name="s_ind1_b"> <datablock type="SNP"> aaaTa </datablock> <datablock type="SNP"> aaaGaaa </datablock> </sample> </individual> </population> </region> <region name="chrom3"> <spacing> <block name="chrom3-micro"> <map-position> 500 </map-position> <offset> 1 </offset> </block> <block name="chrom3-snp"> <map-position> 501 </map-position> <length> 100 </length> <offset> 1 </offset> <locations> 23 </locations> </block> </spacing> <population name="North"> <individual name="n_ind0"> <phase type="unknown"></phase> <phase type="unknown"></phase> <sample name="n_ind0_a"> <datablock type="Microsat"> 18 </datablock> <datablock type="SNP"> T </datablock> </sample> <sample name="n_ind0_b"> <datablock type="Microsat"> 18 </datablock> <datablock type="SNP"> c </datablock> </sample> </individual> <individual name="n_ind1"> <phase type="unknown"></phase> <phase type="unknown"></phase> <sample name="n_ind1_a"> <datablock type="Microsat"> 18 </datablock> <datablock type="SNP"> c </datablock> </sample> <sample name="n_ind1_b"> <datablock type="Microsat"> 19 </datablock> <datablock type="SNP"> c </datablock> </sample> </individual> <individual name="n_ind2"> <phase type="unknown"></phase> <phase type="unknown"></phase> <sample name="n_ind2_a"> <datablock type="Microsat"> 18 </datablock> <datablock type="SNP"> A </datablock> </sample> <sample name="n_ind2_b"> <datablock type="Microsat"> 20 </datablock> <datablock type="SNP"> c </datablock> </sample> </individual> </population> <population name="South"> <individual name="s_ind0"> <phase type="unknown"></phase> <phase type="unknown"></phase> <sample name="s_ind0_a"> <datablock type="Microsat"> 19 </datablock> <datablock type="SNP"> G </datablock> </sample> <sample name="s_ind0_b"> <datablock type="Microsat"> 20 </datablock> <datablock type="SNP"> c </datablock> </sample> </individual> <individual name="s_ind1"> <phase type="unknown"></phase> <phase type="unknown"></phase> <sample name="s_ind1_a"> <datablock type="Microsat"> 19 </datablock> <datablock type="SNP"> c </datablock> </sample> <sample name="s_ind1_b"> <datablock type="Microsat"> 21 </datablock> <datablock type="SNP"> c </datablock> </sample> </individual> </population> </region> </data> </lamarc>