SeqAn3 3.4.0
The Modern C++ library for sequence analysis.
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alignment/pairwise/all.hpp
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1// SPDX-FileCopyrightText: 2006-2025 Knut Reinert & Freie Universität Berlin
2// SPDX-FileCopyrightText: 2016-2025 Knut Reinert & MPI für molekulare Genetik
3// SPDX-License-Identifier: BSD-3-Clause
4
9
263
264#pragma once
265
266#include <seqan3/alignment/pairwise/align_pairwise.hpp>
267#include <seqan3/alignment/pairwise/align_result_selector.hpp>
268#include <seqan3/alignment/pairwise/alignment_algorithm.hpp>
269#include <seqan3/alignment/pairwise/alignment_configurator.hpp>
270#include <seqan3/alignment/pairwise/alignment_result.hpp>
271#include <seqan3/alignment/pairwise/edit_distance_algorithm.hpp>
272#include <seqan3/alignment/pairwise/edit_distance_fwd.hpp>
273#include <seqan3/alignment/pairwise/edit_distance_unbanded.hpp>
274#include <seqan3/alignment/pairwise/policy/all.hpp>
align_pairwise.hpp
Provides pairwise alignment function.
align_result_selector.hpp
Provides seqan3::detail::align_result_selector.
alignment_algorithm.hpp
Provides seqan3::detail::alignment_algorithm.
alignment_configurator.hpp
Provides seqan3::detail::alignment_selector.
alignment_result.hpp
Provides seqan3::alignment_result.
edit_distance_algorithm.hpp
Provides seqan3::detail::edit_distance_algorithm.
edit_distance_fwd.hpp
Forwards for seqan3::edit_distance_unbanded related types.
edit_distance_unbanded.hpp
Provides a pairwise alignment algorithm for edit distance but without band.
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