SeqAn3
3.4.0
The Modern C++ library for sequence analysis.
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debug_stream.hpp
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// SPDX-FileCopyrightText: 2006-2025 Knut Reinert & Freie Universität Berlin
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// SPDX-FileCopyrightText: 2016-2025 Knut Reinert & MPI für molekulare Genetik
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// SPDX-License-Identifier: BSD-3-Clause
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#pragma once
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#include <
iostream
>
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#include <
seqan3/alignment/aligned_sequence/debug_stream_alignment.hpp
>
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#include <
seqan3/alphabet/detail/debug_stream_alphabet.hpp
>
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#include <
seqan3/core/debug_stream/all.hpp
>
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// forward declare
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namespace
std
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{
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namespace
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{
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extern
ostream
cerr
;
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}
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}
// namespace std
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namespace
seqan3
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{
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// ------------------------------------------------------------------
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// seqan3::debug_stream
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// ------------------------------------------------------------------
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inline
debug_stream_type
debug_stream
{
std::cerr
};
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}
// namespace seqan3
std::ostream
std::cerr
seqan3::debug_stream_type
A "pretty printer" for most SeqAn data structures and related types.
Definition
debug_stream_type.hpp:79
all.hpp
Meta-header for the Core / Debug Stream submodule .
debug_stream_alignment.hpp
The seqan3::debug_stream_type overload in order to print alignments.
debug_stream_alphabet.hpp
Provides seqan3::debug_stream and related types.
seqan3::debug_stream
debug_stream_type debug_stream
A global instance of seqan3::debug_stream_type.
Definition
debug_stream.hpp:38
iostream
seqan3
The main SeqAn3 namespace.
Definition
aligned_sequence_concept.hpp:26
std
SeqAn specific customisations in the standard namespace.
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seqan3
core
debug_stream.hpp
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