sequence_file/output_options.hpp

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// SPDX-FileCopyrightText: 2006-2025 Knut Reinert & Freie Universität Berlin
// SPDX-FileCopyrightText: 2016-2025 Knut Reinert & MPI für molekulare Genetik
// SPDX-License-Identifier: BSD-3-Clause

 
#pragma once
 
#include <seqan3/core/platform.hpp>
 
namespace seqan3
{

struct sequence_file_output_options
{
    bool fasta_legacy_id_marker = false;
    bool fasta_blank_before_id = false;
    uint32_t fasta_letters_per_line = 80;
    //TODO:
    //     bool        fasta_charcounts        = false;

    bool fastq_double_id = false;

    bool add_carriage_return = false;

    bool embl_genbank_complete_header = false;
};
 
} // namespace seqan3